Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Gm13453-201ENSMUST00000118708 357 ntBASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Gm27618-201ENSMUST00000183671 60 ntBASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Gm43575-201ENSMUST00000196420 516 ntBASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.12□□□□□ -0.63
H2afb1Q9CQ70 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm15770-201ENSMUST00000117498 584 ntBASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm27772-201ENSMUST00000184900 187 ntBASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm43703-201ENSMUST00000200523 763 ntBASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm6888-201ENSMUST00000221983 706 ntBASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
H2afb1Q9CQ70 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
H2afb1Q9CQ70 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms