Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Gm24420-201ENSMUST00000176676 59 ntBASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H1fooQ8VIK3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm6912-201ENSMUST00000117218 544 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm4875-201ENSMUST00000118257 786 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gm7775-201ENSMUST00000218871 853 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H1fooQ8VIK3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms