Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Rpph1-201ENSMUST00000175096 319 ntBASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rpa1Q8VEE4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Gm43514-201ENSMUST00000198852 424 ntBASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Gm5364-201ENSMUST00000216789 889 ntBASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rpa1Q8VEE4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm29310-201ENSMUST00000185468 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21825-201ENSMUST00000185728 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm29109-201ENSMUST00000185895 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21896-201ENSMUST00000186520 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21873-201ENSMUST00000186728 696 ntBASIC13.65□□□□□ -0.22
Rpa1Q8VEE4 Gm21794-201ENSMUST00000187056 696 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms