Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdt1Q8R4E9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Gm5354-201ENSMUST00000182417 973 ntBASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Gm45331-201ENSMUST00000209868 554 ntBASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdt1Q8R4E9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Gm12341-201ENSMUST00000119724 503 ntBASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Gm5356-201ENSMUST00000093326 615 ntBASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdt1Q8R4E9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.14□□□□□ -0.31
Cdt1Q8R4E9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms