Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Gm28631-201ENSMUST00000190740 334 ntBASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf39Q8K2Z2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.06□□□□□ -0.16
Prpf39Q8K2Z2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf39Q8K2Z2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms