Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Alx1Q8C8B0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.77■□□□□ 0.11
Alx1Q8C8B0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gm14350-201ENSMUST00000116642 640 ntBASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gm8213-201ENSMUST00000118191 441 ntBASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Alx1Q8C8B0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm17150-201ENSMUST00000165577 381 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Mir7221-201ENSMUST00000184009 72 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm7561-201ENSMUST00000211203 886 ntBASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Alx1Q8C8B0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Alx1Q8C8B0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms