Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.99□□□□□ -0.17
Trub1Q8C0D0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm12485-201ENSMUST00000119641 291 ntBASIC13.99□□□□□ -0.17
Trub1Q8C0D0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm16215-201ENSMUST00000161990 637 ntBASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.99□□□□□ -0.17
Trub1Q8C0D0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm42612-201ENSMUST00000197986 623 ntBASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm43170-201ENSMUST00000199827 612 ntBASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trub1Q8C0D0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm12403-201ENSMUST00000121384 959 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm15376-201ENSMUST00000122258 783 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm19078-201ENSMUST00000206311 727 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm5161-201ENSMUST00000075243 853 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trub1Q8C0D0 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trub1Q8C0D0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms