Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm12203-201ENSMUST00000118235 598 ntBASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm12209-201ENSMUST00000120089 596 ntBASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm27331-201ENSMUST00000183705 60 ntBASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm29705-201ENSMUST00000212598 474 ntBASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3rf2Q8BZT2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Gm13392-201ENSMUST00000117708 150 ntBASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Gm12384-201ENSMUST00000119228 919 ntBASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Gm16177-201ENSMUST00000120728 718 ntBASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3rf2Q8BZT2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3rf2Q8BZT2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gm17420-201ENSMUST00000164753 153 ntBASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3rf2Q8BZT2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms