Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ubr7Q8BU04 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Ubr7Q8BU04 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Gm14350-201ENSMUST00000116642 640 ntBASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Gm11425-201ENSMUST00000119608 498 ntBASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Gm9396-201ENSMUST00000076703 567 ntBASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.64□□□□□ -0.23
Ubr7Q8BU04 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm6447-201ENSMUST00000118905 835 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm24644-201ENSMUST00000157114 139 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm29649-201ENSMUST00000185649 419 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr7Q8BU04 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms