Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cpne3Q8BT60 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gm15693-201ENSMUST00000120470 637 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gm27533-201ENSMUST00000183800 152 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gm21470-201ENSMUST00000187680 696 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gm9229-201ENSMUST00000222777 126 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Rubie-203ENSMUST00000227803 2430 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.12□□□□□ -0.31
Cpne3Q8BT60 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cpne3Q8BT60 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Mir698-201ENSMUST00000102164 109 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm23935-201ENSMUST00000102303 57 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm24270-201ENSMUST00000102326 57 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm24245-201ENSMUST00000157318 57 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm27430-201ENSMUST00000184585 107 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm37935-201ENSMUST00000192012 982 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm44333-201ENSMUST00000197168 107 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm8396-201ENSMUST00000057361 823 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cpne3Q8BT60 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cpne3Q8BT60 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms