Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mir6927-201ENSMUST00000184494 71 ntBASIC18.93■□□□□ 0.62
Usp54Q8BL06 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp54Q8BL06 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp54Q8BL06 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp54Q8BL06 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp54Q8BL06 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp54Q8BL06 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp54Q8BL06 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp54Q8BL06 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp54Q8BL06 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC18.93■□□□□ 0.62
Usp54Q8BL06 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.92■□□□□ 0.62
Usp54Q8BL06 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp54Q8BL06 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Gm27046-201ENSMUST00000182160 463 ntBASIC18.92■□□□□ 0.62
Usp54Q8BL06 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Ighv8-10-201ENSMUST00000199579 358 ntBASIC18.92■□□□□ 0.62
Usp54Q8BL06 Gm45224-201ENSMUST00000208203 414 ntBASIC18.92■□□□□ 0.62
Usp54Q8BL06 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Usp54Q8BL06 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Mir5120-201ENSMUST00000175020 78 ntBASIC18.91■□□□□ 0.62
Usp54Q8BL06 Gm9678-201ENSMUST00000198979 1149 ntBASIC18.91■□□□□ 0.62
Usp54Q8BL06 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp54Q8BL06 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Gm23200-201ENSMUST00000104379 132 ntBASIC18.9■□□□□ 0.62
Usp54Q8BL06 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp54Q8BL06 Gm37737-201ENSMUST00000195013 1638 ntBASIC18.9■□□□□ 0.62
Usp54Q8BL06 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.9■□□□□ 0.62
Usp54Q8BL06 Gm4909-201ENSMUST00000118749 794 ntBASIC18.89■□□□□ 0.62
Usp54Q8BL06 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Gm25700-201ENSMUST00000177693 110 ntBASIC18.89■□□□□ 0.62
Usp54Q8BL06 Gstp-ps-201ENSMUST00000195526 631 ntBASIC18.89■□□□□ 0.62
Usp54Q8BL06 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp54Q8BL06 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp54Q8BL06 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Gm13736-201ENSMUST00000119272 253 ntBASIC18.89■□□□□ 0.61
Usp54Q8BL06 Gm15547-201ENSMUST00000122152 333 ntBASIC18.89■□□□□ 0.61
Usp54Q8BL06 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Usp54Q8BL06 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms