Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Gm5354-201ENSMUST00000182417 973 ntBASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Gm19078-201ENSMUST00000206311 727 ntBASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gm7488-201ENSMUST00000117148 684 ntBASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gm12485-201ENSMUST00000119641 291 ntBASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.78□□□□□ -0.36
Atg4bQ8BGE6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Atg4bQ8BGE6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Atg4bQ8BGE6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atg4bQ8BGE6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atg4bQ8BGE6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atg4bQ8BGE6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Atg4bQ8BGE6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm11524-201ENSMUST00000119349 807 ntBASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm26464-201ENSMUST00000157094 305 ntBASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm5866-201ENSMUST00000177881 973 ntBASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atg4bQ8BGE6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms