Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.95□□□□□ -0.34
Vrk1Q80X41 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.95□□□□□ -0.34
Vrk1Q80X41 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.95□□□□□ -0.34
Vrk1Q80X41 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.95□□□□□ -0.34
Vrk1Q80X41 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.95□□□□□ -0.34
Vrk1Q80X41 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.95□□□□□ -0.34
Vrk1Q80X41 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.94□□□□□ -0.34
Vrk1Q80X41 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.94□□□□□ -0.34
Vrk1Q80X41 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Gm8598-201ENSMUST00000221184 836 ntBASIC12.94□□□□□ -0.34
Vrk1Q80X41 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.94□□□□□ -0.34
Vrk1Q80X41 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vrk1Q80X41 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.93□□□□□ -0.34
Vrk1Q80X41 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.93□□□□□ -0.34
Vrk1Q80X41 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Gm8584-201ENSMUST00000171982 758 ntBASIC12.93□□□□□ -0.34
Vrk1Q80X41 Gm8810-201ENSMUST00000172895 754 ntBASIC12.93□□□□□ -0.34
Vrk1Q80X41 Gm5370-201ENSMUST00000187187 574 ntBASIC12.93□□□□□ -0.34
Vrk1Q80X41 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vrk1Q80X41 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms