Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Gm23931-201ENSMUST00000103842 109 ntBASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Gm8652-201ENSMUST00000181363 964 ntBASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Gm5425-201ENSMUST00000214125 459 ntBASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.23□□□□□ -0.13
Prpf38bQ80SY5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Prpf38bQ80SY5 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Grk6-205ENSMUST00000224653 2976 ntBASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Prpf38bQ80SY5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Prpf38bQ80SY5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms