Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Mir874-201ENSMUST00000104769 76 ntBASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rad54bQ6PFE3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm14822-201ENSMUST00000122247 291 ntBASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm27680-201ENSMUST00000184192 160 ntBASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm43703-201ENSMUST00000200523 763 ntBASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rad54bQ6PFE3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Gm27321-201ENSMUST00000185021 205 ntBASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Gm2756-201ENSMUST00000195851 400 ntBASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rad54bQ6PFE3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms