Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Gm11524-201ENSMUST00000119349 807 ntBASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Gm15376-201ENSMUST00000122258 783 ntBASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Mir1894-201ENSMUST00000122802 81 ntBASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Gm15429-201ENSMUST00000151268 798 ntBASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hmgb4Q6P8W9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gm17794-201ENSMUST00000220252 955 ntBASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hmgb4Q6P8W9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb4Q6P8W9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb4Q6P8W9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.21□□□□□ -0.14
Hmgb4Q6P8W9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.21□□□□□ -0.14
Hmgb4Q6P8W9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb4Q6P8W9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.21□□□□□ -0.14
Hmgb4Q6P8W9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hmgb4Q6P8W9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Gm12390-201ENSMUST00000117897 397 ntBASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Mir1982-201ENSMUST00000157368 74 ntBASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Gm9899-201ENSMUST00000065519 555 ntBASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.2□□□□□ -0.14
Hmgb4Q6P8W9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms