Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.35□□□□□ -0.27
VclQ64727 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
VclQ64727 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
VclQ64727 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VclQ64727 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VclQ64727 Gm15371-201ENSMUST00000117057 784 ntBASIC13.34□□□□□ -0.27
VclQ64727 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.34□□□□□ -0.27
VclQ64727 Gm11918-201ENSMUST00000121660 179 ntBASIC13.34□□□□□ -0.27
VclQ64727 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.34□□□□□ -0.27
VclQ64727 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.34□□□□□ -0.27
VclQ64727 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.34□□□□□ -0.27
VclQ64727 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Mir7654-201ENSMUST00000185082 70 ntBASIC13.34□□□□□ -0.27
VclQ64727 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.34□□□□□ -0.27
VclQ64727 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
VclQ64727 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VclQ64727 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VclQ64727 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.33□□□□□ -0.27
VclQ64727 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
VclQ64727 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.33□□□□□ -0.27
VclQ64727 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
VclQ64727 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
VclQ64727 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.33□□□□□ -0.28
VclQ64727 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.33□□□□□ -0.28
VclQ64727 Gm12490-201ENSMUST00000120255 560 ntBASIC13.33□□□□□ -0.28
VclQ64727 Gm26464-201ENSMUST00000157094 305 ntBASIC13.33□□□□□ -0.28
VclQ64727 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.33□□□□□ -0.28
VclQ64727 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.33□□□□□ -0.28
VclQ64727 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.33□□□□□ -0.28
VclQ64727 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
VclQ64727 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
VclQ64727 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VclQ64727 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.32□□□□□ -0.28
VclQ64727 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VclQ64727 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VclQ64727 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VclQ64727 Rubie-203ENSMUST00000227803 2430 ntBASIC13.32□□□□□ -0.28
VclQ64727 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VclQ64727 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VclQ64727 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.32□□□□□ -0.28
VclQ64727 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
VclQ64727 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VclQ64727 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
VclQ64727 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms