Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm37684-201ENSMUST00000192779 355 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm45151-201ENSMUST00000205445 712 ntTSL 2 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm7730-201ENSMUST00000212486 454 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.13□□□□□ -0.79
Foxc1Q61572 AC154838.2-201ENSMUST00000226602 747 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Foxc1Q61572 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 AC163296.2-201ENSMUST00000220177 1315 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.12□□□□□ -0.79
Foxc1Q61572 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Mir1897-201ENSMUST00000122581 272 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Ppp1r2-ps9-202ENSMUST00000173852 882 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Gm27306-201ENSMUST00000183970 107 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Gm10925-201ENSMUST00000189941 678 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Gm38280-201ENSMUST00000192610 158 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Gm44855-201ENSMUST00000205725 362 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Gm44608-201ENSMUST00000206827 855 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.12□□□□□ -0.79
Foxc1Q61572 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC10.12□□□□□ -0.79
Foxc1Q61572 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 AC153522.1-201ENSMUST00000220047 1090 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Shd-206ENSMUST00000225145 998 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 AC154595.1-201ENSMUST00000225533 1059 ntBASIC10.12□□□□□ -0.79
Foxc1Q61572 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Foxc1Q61572 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Foxc1Q61572 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.11□□□□□ -0.79
Foxc1Q61572 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.11□□□□□ -0.79
Foxc1Q61572 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Gm3436-201ENSMUST00000179930 840 ntBASIC10.11□□□□□ -0.79
Foxc1Q61572 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Foxc1Q61572 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms