Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.13□□□□□ -0.31
Vps13aQ5H8C4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm25880-201ENSMUST00000104331 132 ntBASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Gm25951-201ENSMUST00000175330 64 ntBASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps13aQ5H8C4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Gm13875-201ENSMUST00000120162 282 ntBASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Gm29155-201ENSMUST00000185910 269 ntBASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Gm12380-201ENSMUST00000119012 544 ntBASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps13aQ5H8C4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Rprl1-202ENSMUST00000198476 238 ntBASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps13aQ5H8C4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps13aQ5H8C4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps13aQ5H8C4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps13aQ5H8C4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.09□□□□□ -0.31
Vps13aQ5H8C4 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms