Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nlrc4Q3UP24 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gm38223-201ENSMUST00000194484 695 ntBASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Nlrc4Q3UP24 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm11918-201ENSMUST00000121660 179 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm42550-201ENSMUST00000201553 960 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm6983-201ENSMUST00000214912 628 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Nlrc4Q3UP24 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Gm11424-201ENSMUST00000121929 829 ntBASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Gm8463-201ENSMUST00000208573 613 ntBASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.25□□□□□ -0.13
Nlrc4Q3UP24 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms