Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Olfr284-202ENSMUST00000206647 966 ntBASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Gm18935-201ENSMUST00000212692 664 ntBASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upf3aQ3ULJ3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm13342-201ENSMUST00000121055 207 ntBASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm16379-201ENSMUST00000161469 348 ntBASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm38241-201ENSMUST00000192641 898 ntBASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm8762-201ENSMUST00000193486 339 ntBASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm43758-201ENSMUST00000199500 367 ntBASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm44069-201ENSMUST00000204898 506 ntBASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Upf3aQ3ULJ3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upf3aQ3ULJ3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Gm27243-201ENSMUST00000183964 521 ntBASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.2□□□□□ -0.14
Upf3aQ3ULJ3 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms