Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm22191-201ENSMUST00000103831 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24721-201ENSMUST00000103849 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm28018-201ENSMUST00000103869 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm26399-201ENSMUST00000103937 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm25349-201ENSMUST00000177728 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm23616-201ENSMUST00000177797 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm25871-201ENSMUST00000177816 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24752-201ENSMUST00000178240 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24496-201ENSMUST00000178287 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm25649-201ENSMUST00000178476 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm25548-201ENSMUST00000178681 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm23147-201ENSMUST00000178841 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm26095-201ENSMUST00000179270 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm22171-201ENSMUST00000179283 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm23936-201ENSMUST00000179354 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm22619-201ENSMUST00000179516 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm25255-201ENSMUST00000179579 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24755-201ENSMUST00000179691 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm26506-201ENSMUST00000179692 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm25086-201ENSMUST00000179931 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm23243-201ENSMUST00000180047 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24659-201ENSMUST00000180212 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24169-201ENSMUST00000180244 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm23689-201ENSMUST00000180354 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm27359-201ENSMUST00000184153 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm27785-201ENSMUST00000184268 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm27466-201ENSMUST00000184396 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm27703-201ENSMUST00000184836 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gm27430-201ENSMUST00000184585 107 ntBASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gm44333-201ENSMUST00000197168 107 ntBASIC14.39□□□□□ -0.11
Trim43aQ3TL54 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gm18049-201ENSMUST00000208909 581 ntBASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim43aQ3TL54 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.39□□□□□ -0.11
Trim43aQ3TL54 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms