Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm24245-201ENSMUST00000157318 57 ntBASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm9824-201ENSMUST00000178707 561 ntBASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ptchd3Q0EEE2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gm26308-201ENSMUST00000157768 69 ntBASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gm24158-201ENSMUST00000175263 71 ntBASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.09□□□□□ -0.31
Ptchd3Q0EEE2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ptchd3Q0EEE2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.08□□□□□ -0.31
Ptchd3Q0EEE2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ptchd3Q0EEE2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ptchd3Q0EEE2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms