Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm12403-201ENSMUST00000121384 959 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm15429-201ENSMUST00000151268 798 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox4Q06831 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm29608-201ENSMUST00000190444 463 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm42550-201ENSMUST00000201553 960 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.33□□□□□ -0.28
Sox4Q06831 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sox4Q06831 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox4Q06831 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox4Q06831 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Sox4Q06831 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox4Q06831 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.32□□□□□ -0.28
Sox4Q06831 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.32□□□□□ -0.28
Sox4Q06831 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Gm38223-201ENSMUST00000194484 695 ntBASIC13.32□□□□□ -0.28
Sox4Q06831 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.32□□□□□ -0.28
Sox4Q06831 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.32□□□□□ -0.28
Sox4Q06831 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.32□□□□□ -0.28
Sox4Q06831 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sox4Q06831 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sox4Q06831 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sox4Q06831 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Sox4Q06831 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Sox4Q06831 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms