Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm15393-201ENSMUST00000120499 219 ntBASIC14.48□□□□□ -0.09
VcpQ01853 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.48□□□□□ -0.09
VcpQ01853 Mir1894-201ENSMUST00000122802 81 ntBASIC14.48□□□□□ -0.09
VcpQ01853 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.48□□□□□ -0.09
VcpQ01853 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.48□□□□□ -0.09
VcpQ01853 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.48□□□□□ -0.09
VcpQ01853 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
VcpQ01853 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.48□□□□□ -0.09
VcpQ01853 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.48□□□□□ -0.09
VcpQ01853 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.48□□□□□ -0.09
VcpQ01853 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
VcpQ01853 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
VcpQ01853 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
VcpQ01853 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.48□□□□□ -0.09
VcpQ01853 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
VcpQ01853 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.47□□□□□ -0.09
VcpQ01853 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
VcpQ01853 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.47□□□□□ -0.09
VcpQ01853 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
VcpQ01853 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Mir7654-201ENSMUST00000185082 70 ntBASIC14.47□□□□□ -0.09
VcpQ01853 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.47□□□□□ -0.09
VcpQ01853 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
VcpQ01853 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
VcpQ01853 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VcpQ01853 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
VcpQ01853 Gm27572-201ENSMUST00000183702 255 ntBASIC14.46□□□□□ -0.09
VcpQ01853 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.46□□□□□ -0.09
VcpQ01853 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.46□□□□□ -0.09
VcpQ01853 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.46□□□□□ -0.09
VcpQ01853 Gm17794-201ENSMUST00000220252 955 ntBASIC14.46□□□□□ -0.09
VcpQ01853 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.46□□□□□ -0.09
VcpQ01853 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.46□□□□□ -0.09
VcpQ01853 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
VcpQ01853 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VcpQ01853 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.46□□□□□ -0.09
VcpQ01853 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VcpQ01853 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.46□□□□□ -0.09
VcpQ01853 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VcpQ01853 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.46□□□□□ -0.09
VcpQ01853 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VcpQ01853 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VcpQ01853 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VcpQ01853 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcpQ01853 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcpQ01853 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.46□□□□□ -0.1
VcpQ01853 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VcpQ01853 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VcpQ01853 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms