Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trim43cP86449 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.74□□□□□ -0.05
Trim43cP86449 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43cP86449 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.73□□□□□ -0.05
Trim43cP86449 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trim43cP86449 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim43cP86449 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trim43cP86449 Mir7654-201ENSMUST00000185082 70 ntBASIC14.73□□□□□ -0.05
Trim43cP86449 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.73□□□□□ -0.05
Trim43cP86449 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim43cP86449 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim43cP86449 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.73□□□□□ -0.05
Trim43cP86449 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.73□□□□□ -0.05
Trim43cP86449 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.73□□□□□ -0.05
Trim43cP86449 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim43cP86449 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim43cP86449 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim43cP86449 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim43cP86449 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43cP86449 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim43cP86449 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim43cP86449 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim43cP86449 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim43cP86449 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim43cP86449 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Trim43cP86449 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Gm25925-201ENSMUST00000158314 306 ntBASIC14.72□□□□□ -0.05
Trim43cP86449 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trim43cP86449 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.72□□□□□ -0.05
Trim43cP86449 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim43cP86449 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.72□□□□□ -0.05
Trim43cP86449 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim43cP86449 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trim43cP86449 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43cP86449 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.72□□□□□ -0.05
Trim43cP86449 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim43cP86449 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43cP86449 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms