Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SgcbP82349 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.11□□□□□ -0.47
SgcbP82349 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SgcbP82349 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SgcbP82349 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgcbP82349 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SgcbP82349 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcbP82349 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.1□□□□□ -0.47
SgcbP82349 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcbP82349 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.1□□□□□ -0.47
SgcbP82349 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.1□□□□□ -0.47
SgcbP82349 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.1□□□□□ -0.47
SgcbP82349 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SgcbP82349 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.1□□□□□ -0.47
SgcbP82349 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SgcbP82349 Gm6180-201ENSMUST00000065243 498 ntBASIC12.1□□□□□ -0.47
SgcbP82349 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SgcbP82349 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.1□□□□□ -0.47
SgcbP82349 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.1□□□□□ -0.47
SgcbP82349 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
SgcbP82349 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgcbP82349 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SgcbP82349 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgcbP82349 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SgcbP82349 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SgcbP82349 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
SgcbP82349 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.09□□□□□ -0.47
SgcbP82349 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
SgcbP82349 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.09□□□□□ -0.47
SgcbP82349 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.09□□□□□ -0.47
SgcbP82349 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.09□□□□□ -0.47
SgcbP82349 Gm11918-201ENSMUST00000121660 179 ntBASIC12.09□□□□□ -0.47
SgcbP82349 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.09□□□□□ -0.47
SgcbP82349 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.09□□□□□ -0.47
SgcbP82349 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.09□□□□□ -0.47
SgcbP82349 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.09□□□□□ -0.47
SgcbP82349 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.09□□□□□ -0.47
SgcbP82349 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SgcbP82349 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.09□□□□□ -0.47
SgcbP82349 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SgcbP82349 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SgcbP82349 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
SgcbP82349 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.09□□□□□ -0.47
SgcbP82349 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SgcbP82349 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms