Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Shox2P70390 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.39□□□□□ -0.27
Shox2P70390 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Shox2P70390 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Shox2P70390 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shox2P70390 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.39□□□□□ -0.27
Shox2P70390 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Shox2P70390 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Shox2P70390 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.38□□□□□ -0.27
Shox2P70390 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Shox2P70390 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.38□□□□□ -0.27
Shox2P70390 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Shox2P70390 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
Shox2P70390 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.38□□□□□ -0.27
Shox2P70390 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.38□□□□□ -0.27
Shox2P70390 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Shox2P70390 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.38□□□□□ -0.27
Shox2P70390 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.38□□□□□ -0.27
Shox2P70390 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.38□□□□□ -0.27
Shox2P70390 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.38□□□□□ -0.27
Shox2P70390 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.38□□□□□ -0.27
Shox2P70390 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Shox2P70390 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shox2P70390 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Shox2P70390 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Shox2P70390 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Daam2-202ENSMUST00000224595 1926 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.37□□□□□ -0.27
Shox2P70390 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Shox2P70390 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.37□□□□□ -0.27
Shox2P70390 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Shox2P70390 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.37□□□□□ -0.27
Shox2P70390 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Shox2P70390 Gm29310-201ENSMUST00000185468 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21825-201ENSMUST00000185728 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm29109-201ENSMUST00000185895 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21896-201ENSMUST00000186520 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21873-201ENSMUST00000186728 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21794-201ENSMUST00000187056 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21880-201ENSMUST00000187275 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21826-201ENSMUST00000187451 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21198-201ENSMUST00000188393 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21749-201ENSMUST00000189343 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21901-201ENSMUST00000189568 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm29424-201ENSMUST00000189716 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm28599-201ENSMUST00000189838 694 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21867-201ENSMUST00000189917 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm29269-201ENSMUST00000190087 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21722-201ENSMUST00000190153 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm28423-201ENSMUST00000190701 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21899-201ENSMUST00000190745 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21910-201ENSMUST00000191163 696 ntBASIC13.37□□□□□ -0.27
Shox2P70390 Gm21849-201ENSMUST00000191571 696 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms