Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm6963-201ENSMUST00000147879 379 ntBASIC21.73■■□□□ 1.07
Cux2P70298 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cux2P70298 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC21.73■■□□□ 1.07
Cux2P70298 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC21.73■■□□□ 1.07
Cux2P70298 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC21.73■■□□□ 1.07
Cux2P70298 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Gm7600-201ENSMUST00000209657 785 ntBASIC21.73■■□□□ 1.07
Cux2P70298 AC135469.1-201ENSMUST00000225984 772 ntBASIC21.73■■□□□ 1.07
Cux2P70298 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cux2P70298 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC21.73■■□□□ 1.07
Cux2P70298 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC21.72■■□□□ 1.07
Cux2P70298 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC21.72■■□□□ 1.07
Cux2P70298 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC21.72■■□□□ 1.07
Cux2P70298 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 AC166992.1-201ENSMUST00000216356 565 ntBASIC21.72■■□□□ 1.07
Cux2P70298 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cux2P70298 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC21.72■■□□□ 1.07
Cux2P70298 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Cux2P70298 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cux2P70298 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cux2P70298 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC21.72■■□□□ 1.07
Cux2P70298 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Cux2P70298 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Cux2P70298 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Gm43509-201ENSMUST00000196551 2594 ntBASIC21.72■■□□□ 1.07
Cux2P70298 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Cux2P70298 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC21.72■■□□□ 1.07
Cux2P70298 Gm6161-201ENSMUST00000121942 1102 ntBASIC21.72■■□□□ 1.07
Cux2P70298 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Cux2P70298 Gm6254-201ENSMUST00000168178 1072 ntBASIC21.72■■□□□ 1.07
Cux2P70298 Gm6153-201ENSMUST00000172004 1058 ntBASIC21.72■■□□□ 1.07
Cux2P70298 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cux2P70298 Gm5641-202ENSMUST00000198699 1080 ntBASIC21.72■■□□□ 1.07
Cux2P70298 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC21.72■■□□□ 1.07
Cux2P70298 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cux2P70298 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Cux2P70298 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Cux2P70298 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC21.71■■□□□ 1.07
Cux2P70298 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC21.71■■□□□ 1.07
Cux2P70298 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC21.71■■□□□ 1.07
Cux2P70298 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC21.71■■□□□ 1.07
Cux2P70298 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Gm14832-201ENSMUST00000121289 322 ntBASIC21.71■■□□□ 1.07
Cux2P70298 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC21.71■■□□□ 1.07
Cux2P70298 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC21.71■■□□□ 1.07
Cux2P70298 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cux2P70298 Gm10312-201ENSMUST00000078515 489 ntBASIC21.71■■□□□ 1.07
Cux2P70298 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Cux2P70298 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cux2P70298 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Cux2P70298 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Cux2P70298 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC21.7■■□□□ 1.06
Cux2P70298 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.7■■□□□ 1.06
Cux2P70298 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Cux2P70298 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC21.7■■□□□ 1.06
Cux2P70298 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cux2P70298 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Cux2P70298 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Cux2P70298 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Gm2673-201ENSMUST00000120958 1608 ntBASIC21.69■■□□□ 1.06
Cux2P70298 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cux2P70298 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms