Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Lsm6P62313 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.92□□□□□ -0.5
Lsm6P62313 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm6P62313 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm6P62313 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm6P62313 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Lsm6P62313 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Lsm6P62313 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Gm15487-201ENSMUST00000122373 465 ntBASIC11.91□□□□□ -0.5
Lsm6P62313 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm6P62313 Gm18041-201ENSMUST00000218210 618 ntBASIC11.91□□□□□ -0.5
Lsm6P62313 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.91□□□□□ -0.5
Lsm6P62313 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Lsm6P62313 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm6P62313 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.91□□□□□ -0.5
Lsm6P62313 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm6P62313 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.91□□□□□ -0.5
Lsm6P62313 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.91□□□□□ -0.5
Lsm6P62313 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm6P62313 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm6P62313 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm6P62313 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm6P62313 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.9□□□□□ -0.5
Lsm6P62313 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.9□□□□□ -0.5
Lsm6P62313 Gm14719-201ENSMUST00000121891 340 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.9□□□□□ -0.5
Lsm6P62313 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Gm24694-201ENSMUST00000180054 110 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 Gm27663-201ENSMUST00000184839 110 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 Gm29667-201ENSMUST00000190817 490 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.9□□□□□ -0.5
Lsm6P62313 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm6P62313 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm6P62313 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Lsm6P62313 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.9□□□□□ -0.5
Lsm6P62313 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm6P62313 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Lsm6P62313 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
Lsm6P62313 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Lsm6P62313 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms