Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Gm18624-201ENSMUST00000220966 658 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Gm19220-201ENSMUST00000222682 803 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.42□□□□□ -0.26
Pdx1P52946 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pdx1P52946 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pdx1P52946 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.41□□□□□ -0.26
Pdx1P52946 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.41□□□□□ -0.26
Pdx1P52946 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pdx1P52946 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.41□□□□□ -0.26
Pdx1P52946 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pdx1P52946 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.41□□□□□ -0.26
Pdx1P52946 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.41□□□□□ -0.26
Pdx1P52946 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.41□□□□□ -0.26
Pdx1P52946 Gm5161-201ENSMUST00000075243 853 ntBASIC13.41□□□□□ -0.26
Pdx1P52946 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pdx1P52946 Gm24447-201ENSMUST00000083977 338 ntBASIC13.41□□□□□ -0.26
Pdx1P52946 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.41□□□□□ -0.26
Pdx1P52946 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.41□□□□□ -0.26
Pdx1P52946 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.41□□□□□ -0.26
Pdx1P52946 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pdx1P52946 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pdx1P52946 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pdx1P52946 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
Pdx1P52946 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Pdx1P52946 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.4□□□□□ -0.26
Pdx1P52946 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.4□□□□□ -0.26
Pdx1P52946 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.4□□□□□ -0.26
Pdx1P52946 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.4□□□□□ -0.26
Pdx1P52946 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.4□□□□□ -0.26
Pdx1P52946 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pdx1P52946 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.4□□□□□ -0.26
Pdx1P52946 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pdx1P52946 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pdx1P52946 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pdx1P52946 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pdx1P52946 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Pdx1P52946 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.39□□□□□ -0.27
Pdx1P52946 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.39□□□□□ -0.27
Pdx1P52946 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pdx1P52946 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms