Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.93□□□□□ -0.02
Brca1P48754 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.93□□□□□ -0.02
Brca1P48754 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.92□□□□□ -0.02
Brca1P48754 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Brca1P48754 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Gm17208-201ENSMUST00000168388 535 ntBASIC14.92□□□□□ -0.02
Brca1P48754 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.92□□□□□ -0.02
Brca1P48754 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.92□□□□□ -0.02
Brca1P48754 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Gm45219-201ENSMUST00000205602 465 ntBASIC14.92□□□□□ -0.02
Brca1P48754 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.92□□□□□ -0.02
Brca1P48754 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.92□□□□□ -0.02
Brca1P48754 Gm3508-201ENSMUST00000186012 792 ntBASIC14.92□□□□□ -0.02
Brca1P48754 Gm44405-201ENSMUST00000198952 126 ntBASIC14.92□□□□□ -0.02
Brca1P48754 Gm44551-201ENSMUST00000208804 171 ntBASIC14.92□□□□□ -0.02
Brca1P48754 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Brca1P48754 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Brca1P48754 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Brca1P48754 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.91□□□□□ -0.02
Brca1P48754 Gm15547-201ENSMUST00000122152 333 ntBASIC14.91□□□□□ -0.02
Brca1P48754 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.91□□□□□ -0.02
Brca1P48754 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Brca1P48754 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Brca1P48754 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Brca1P48754 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Brca1P48754 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Brca1P48754 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Brca1P48754 Gm45224-201ENSMUST00000208203 414 ntBASIC14.9□□□□□ -0.02
Brca1P48754 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Brca1P48754 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms