Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LmnaP48678 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LmnaP48678 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LmnaP48678 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.12□□□□□ -0.15
LmnaP48678 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.12□□□□□ -0.15
LmnaP48678 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Gm27731-201ENSMUST00000185192 107 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Gm18307-201ENSMUST00000206864 949 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Gm2594-201ENSMUST00000214774 742 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.12□□□□□ -0.15
LmnaP48678 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.12□□□□□ -0.15
LmnaP48678 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.12□□□□□ -0.15
LmnaP48678 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LmnaP48678 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LmnaP48678 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.12□□□□□ -0.15
LmnaP48678 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.12□□□□□ -0.15
LmnaP48678 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LmnaP48678 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LmnaP48678 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.11□□□□□ -0.15
LmnaP48678 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.11□□□□□ -0.15
LmnaP48678 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.11□□□□□ -0.15
LmnaP48678 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LmnaP48678 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.11□□□□□ -0.15
LmnaP48678 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LmnaP48678 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.11□□□□□ -0.15
LmnaP48678 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.11□□□□□ -0.15
LmnaP48678 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.11□□□□□ -0.15
LmnaP48678 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LmnaP48678 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
LmnaP48678 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.1□□□□□ -0.15
LmnaP48678 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.1□□□□□ -0.15
LmnaP48678 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.1□□□□□ -0.15
LmnaP48678 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LmnaP48678 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.1□□□□□ -0.15
LmnaP48678 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Gm15393-201ENSMUST00000120499 219 ntBASIC14.1□□□□□ -0.15
LmnaP48678 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LmnaP48678 Gm16570-201ENSMUST00000161951 436 ntBASIC14.1□□□□□ -0.15
LmnaP48678 Gm27572-201ENSMUST00000183702 255 ntBASIC14.1□□□□□ -0.15
LmnaP48678 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LmnaP48678 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LmnaP48678 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms