Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx2P48379 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rfx2P48379 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx2P48379 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Rfx2P48379 Gm15678-201ENSMUST00000117573 960 ntBASIC14.22□□□□□ -0.13
Rfx2P48379 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rfx2P48379 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfx2P48379 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Gm19078-201ENSMUST00000206311 727 ntBASIC14.22□□□□□ -0.13
Rfx2P48379 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.22□□□□□ -0.13
Rfx2P48379 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfx2P48379 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.22□□□□□ -0.13
Rfx2P48379 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfx2P48379 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx2P48379 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.22□□□□□ -0.13
Rfx2P48379 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfx2P48379 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.21□□□□□ -0.13
Rfx2P48379 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rfx2P48379 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Gm4984-201ENSMUST00000115987 360 ntBASIC14.21□□□□□ -0.13
Rfx2P48379 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.21□□□□□ -0.13
Rfx2P48379 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.21□□□□□ -0.13
Rfx2P48379 Gm43094-201ENSMUST00000196549 921 ntBASIC14.21□□□□□ -0.13
Rfx2P48379 Gm6266-201ENSMUST00000203844 806 ntBASIC14.21□□□□□ -0.13
Rfx2P48379 Gm5035-201ENSMUST00000215581 927 ntBASIC14.21□□□□□ -0.13
Rfx2P48379 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.21□□□□□ -0.13
Rfx2P48379 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.21□□□□□ -0.13
Rfx2P48379 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfx2P48379 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfx2P48379 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfx2P48379 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rfx2P48379 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx2P48379 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx2P48379 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Rfx2P48379 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfx2P48379 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Rfx2P48379 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.2□□□□□ -0.14
Rfx2P48379 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.2□□□□□ -0.14
Rfx2P48379 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.2□□□□□ -0.14
Rfx2P48379 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.2□□□□□ -0.14
Rfx2P48379 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.2□□□□□ -0.14
Rfx2P48379 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.2□□□□□ -0.14
Rfx2P48379 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rfx2P48379 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rfx2P48379 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfx2P48379 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.2□□□□□ -0.14
Rfx2P48379 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms