Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.61□□□□□ -0.39
Hoxc5P32043 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc5P32043 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc5P32043 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hoxc5P32043 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.6□□□□□ -0.39
Hoxc5P32043 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.6□□□□□ -0.39
Hoxc5P32043 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Gm8927-201ENSMUST00000181978 981 ntBASIC12.6□□□□□ -0.39
Hoxc5P32043 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.6□□□□□ -0.39
Hoxc5P32043 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.6□□□□□ -0.39
Hoxc5P32043 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Gm3222-201ENSMUST00000071282 990 ntBASIC12.6□□□□□ -0.39
Hoxc5P32043 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc5P32043 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc5P32043 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.59□□□□□ -0.39
Hoxc5P32043 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Mir698-201ENSMUST00000102164 109 ntBASIC12.59□□□□□ -0.39
Hoxc5P32043 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Gm25144-201ENSMUST00000179561 110 ntBASIC12.59□□□□□ -0.39
Hoxc5P32043 Gm25352-201ENSMUST00000179815 110 ntBASIC12.59□□□□□ -0.39
Hoxc5P32043 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Gm44344-201ENSMUST00000200287 129 ntBASIC12.59□□□□□ -0.39
Hoxc5P32043 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.59□□□□□ -0.39
Hoxc5P32043 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hoxc5P32043 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxc5P32043 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc5P32043 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc5P32043 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxc5P32043 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms