Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Gm15429-201ENSMUST00000151268 798 ntBASIC14.61□□□□□ -0.07
Irf8P23611 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.61□□□□□ -0.07
Irf8P23611 Gm27701-201ENSMUST00000184498 110 ntBASIC14.61□□□□□ -0.07
Irf8P23611 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.61□□□□□ -0.07
Irf8P23611 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.61□□□□□ -0.07
Irf8P23611 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.61□□□□□ -0.07
Irf8P23611 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Irf8P23611 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Irf8P23611 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.61□□□□□ -0.07
Irf8P23611 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Irf8P23611 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Irf8P23611 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.6□□□□□ -0.07
Irf8P23611 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Irf8P23611 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Irf8P23611 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.6□□□□□ -0.07
Irf8P23611 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.6□□□□□ -0.07
Irf8P23611 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.6□□□□□ -0.07
Irf8P23611 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.6□□□□□ -0.07
Irf8P23611 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Irf8P23611 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Irf8P23611 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.6□□□□□ -0.07
Irf8P23611 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Irf8P23611 Gm6180-201ENSMUST00000065243 498 ntBASIC14.6□□□□□ -0.07
Irf8P23611 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Irf8P23611 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Irf8P23611 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Irf8P23611 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.6□□□□□ -0.07
Irf8P23611 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.6□□□□□ -0.07
Irf8P23611 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.59□□□□□ -0.07
Irf8P23611 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.59□□□□□ -0.07
Irf8P23611 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Irf8P23611 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.59□□□□□ -0.07
Irf8P23611 Gm26315-201ENSMUST00000083890 321 ntBASIC14.59□□□□□ -0.07
Irf8P23611 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Irf8P23611 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.59□□□□□ -0.07
Irf8P23611 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.59□□□□□ -0.07
Irf8P23611 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Irf8P23611 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Irf8P23611 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.58□□□□□ -0.07
Irf8P23611 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.58□□□□□ -0.07
Irf8P23611 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms