Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Tpm3P21107 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tpm3P21107 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tpm3P21107 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tpm3P21107 Pck2-205ENSMUST00000226352 2784 ntBASIC15.18■□□□□ 0.02
Tpm3P21107 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.17■□□□□ 0.02
Tpm3P21107 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tpm3P21107 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Tpm3P21107 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.17■□□□□ 0.02
Tpm3P21107 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.17■□□□□ 0.02
Tpm3P21107 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tpm3P21107 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tpm3P21107 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Gm27301-201ENSMUST00000184012 127 ntBASIC15.16■□□□□ 0.02
Tpm3P21107 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tpm3P21107 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Tpm3P21107 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tpm3P21107 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.16■□□□□ 0.02
Tpm3P21107 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.16■□□□□ 0.02
Tpm3P21107 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tpm3P21107 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Tpm3P21107 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.15■□□□□ 0.02
Tpm3P21107 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Tpm3P21107 Gm27628-201ENSMUST00000184911 107 ntBASIC15.15■□□□□ 0.02
Tpm3P21107 Gm21362-201ENSMUST00000194272 928 ntBASIC15.15■□□□□ 0.02
Tpm3P21107 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Tpm3P21107 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.15■□□□□ 0.02
Tpm3P21107 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.15■□□□□ 0.02
Tpm3P21107 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.15■□□□□ 0.02
Tpm3P21107 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tpm3P21107 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tpm3P21107 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tpm3P21107 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.15■□□□□ 0.02
Tpm3P21107 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.15■□□□□ 0.02
Tpm3P21107 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tpm3P21107 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.14■□□□□ 0.01
Tpm3P21107 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tpm3P21107 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tpm3P21107 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.14■□□□□ 0.01
Tpm3P21107 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms