Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.69□□□□□ -0.22
Chrna4O70174 Gm27437-201ENSMUST00000183429 107 ntBASIC13.69□□□□□ -0.22
Chrna4O70174 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Chrna4O70174 Mir6977-201ENSMUST00000184960 64 ntBASIC13.69□□□□□ -0.22
Chrna4O70174 Gm19078-201ENSMUST00000206311 727 ntBASIC13.69□□□□□ -0.22
Chrna4O70174 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.69□□□□□ -0.22
Chrna4O70174 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chrna4O70174 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.69□□□□□ -0.22
Chrna4O70174 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.69□□□□□ -0.22
Chrna4O70174 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chrna4O70174 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chrna4O70174 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.68□□□□□ -0.22
Chrna4O70174 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.68□□□□□ -0.22
Chrna4O70174 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.68□□□□□ -0.22
Chrna4O70174 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.68□□□□□ -0.22
Chrna4O70174 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chrna4O70174 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chrna4O70174 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.67□□□□□ -0.22
Chrna4O70174 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.67□□□□□ -0.22
Chrna4O70174 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chrna4O70174 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chrna4O70174 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chrna4O70174 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chrna4O70174 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.67□□□□□ -0.22
Chrna4O70174 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.67□□□□□ -0.22
Chrna4O70174 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chrna4O70174 Gm26464-201ENSMUST00000157094 305 ntBASIC13.67□□□□□ -0.22
Chrna4O70174 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.67□□□□□ -0.22
Chrna4O70174 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Chrna4O70174 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.67□□□□□ -0.22
Chrna4O70174 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.67□□□□□ -0.22
Chrna4O70174 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chrna4O70174 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.66□□□□□ -0.22
Chrna4O70174 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.66□□□□□ -0.22
Chrna4O70174 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chrna4O70174 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.66□□□□□ -0.22
Chrna4O70174 Gm11524-201ENSMUST00000119349 807 ntBASIC13.66□□□□□ -0.22
Chrna4O70174 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.66□□□□□ -0.22
Chrna4O70174 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.66□□□□□ -0.22
Chrna4O70174 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.66□□□□□ -0.22
Chrna4O70174 Gm12403-201ENSMUST00000121384 959 ntBASIC13.66□□□□□ -0.22
Chrna4O70174 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms