Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Smarce1O54941 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.13■□□□□ 0.17
Smarce1O54941 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.13■□□□□ 0.17
Smarce1O54941 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Gm12585-201ENSMUST00000117307 290 ntBASIC16.13■□□□□ 0.17
Smarce1O54941 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Gm2756-201ENSMUST00000195851 400 ntBASIC16.13■□□□□ 0.17
Smarce1O54941 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.13■□□□□ 0.17
Smarce1O54941 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Smarce1O54941 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Smarce1O54941 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Smarce1O54941 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smarce1O54941 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Smarce1O54941 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC16.13■□□□□ 0.17
Smarce1O54941 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smarce1O54941 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarce1O54941 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.12■□□□□ 0.17
Smarce1O54941 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.12■□□□□ 0.17
Smarce1O54941 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.12■□□□□ 0.17
Smarce1O54941 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.12■□□□□ 0.17
Smarce1O54941 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Smarce1O54941 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.12■□□□□ 0.17
Smarce1O54941 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Gm6912-201ENSMUST00000117218 544 ntBASIC16.12■□□□□ 0.17
Smarce1O54941 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Smarce1O54941 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.12■□□□□ 0.17
Smarce1O54941 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.12■□□□□ 0.17
Smarce1O54941 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.12■□□□□ 0.17
Smarce1O54941 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smarce1O54941 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.12■□□□□ 0.17
Smarce1O54941 Chchd1-203ENSMUST00000224633 557 ntBASIC16.12■□□□□ 0.17
Smarce1O54941 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smarce1O54941 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.12■□□□□ 0.17
Smarce1O54941 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smarce1O54941 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smarce1O54941 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarce1O54941 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.11■□□□□ 0.17
Smarce1O54941 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Smarce1O54941 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Mir874-201ENSMUST00000104769 76 ntBASIC16.11■□□□□ 0.17
Smarce1O54941 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarce1O54941 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Smarce1O54941 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.11■□□□□ 0.17
Smarce1O54941 Gm15770-201ENSMUST00000117498 584 ntBASIC16.11■□□□□ 0.17
Smarce1O54941 Gm11594-201ENSMUST00000122313 162 ntBASIC16.11■□□□□ 0.17
Smarce1O54941 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.11■□□□□ 0.17
Smarce1O54941 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms