Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 AA619741-201ENSMUST00000195095 646 ntBASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Gm45453-201ENSMUST00000211758 853 ntBASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shisa8J3QNX5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Gm13015-201ENSMUST00000118674 204 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Gm38225-201ENSMUST00000194001 393 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Gm18057-201ENSMUST00000208220 503 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.35□□□□□ -0.43
Shisa8J3QNX5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shisa8J3QNX5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.34□□□□□ -0.43
Shisa8J3QNX5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms