Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn20G5E8X0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Gm26308-201ENSMUST00000157768 69 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Gm37230-201ENSMUST00000194491 818 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Gm43474-201ENSMUST00000196415 774 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Gm9182-201ENSMUST00000217829 639 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Gm5867-201ENSMUST00000063197 592 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn20G5E8X0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Gm38225-201ENSMUST00000194001 393 ntBASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn20G5E8X0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms