Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim55G3X8Y1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim55G3X8Y1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.9□□□□□ -0.19
Trim55G3X8Y1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim55G3X8Y1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm43514-201ENSMUST00000198852 424 ntBASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm6443-201ENSMUST00000203599 874 ntBASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim55G3X8Y1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Gm13464-201ENSMUST00000119418 935 ntBASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms