Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm12644-201ENSMUST00000119935 606 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 AA414768-201ENSMUST00000121924 1257 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccnb1ip1D3Z3K2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccnb1ip1D3Z3K2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccnb1ip1D3Z3K2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccnb1ip1D3Z3K2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms