Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm15653-201ENSMUST00000119247 907 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm8927-201ENSMUST00000181978 981 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm27533-201ENSMUST00000183800 152 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm2213-201ENSMUST00000197485 688 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm5312-201ENSMUST00000203728 547 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm3222-201ENSMUST00000071282 990 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.13□□□□□ -0.63
Trav18A0A075B656 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav18A0A075B656 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Gm15693-201ENSMUST00000120470 637 ntBASIC11.12□□□□□ -0.63
Trav18A0A075B656 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Gm27622-201ENSMUST00000183779 60 ntBASIC11.12□□□□□ -0.63
Trav18A0A075B656 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.12□□□□□ -0.63
Trav18A0A075B656 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Gm9229-201ENSMUST00000222777 126 ntBASIC11.12□□□□□ -0.63
Trav18A0A075B656 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav18A0A075B656 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.11□□□□□ -0.63
Trav18A0A075B656 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms