Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim3Q9R1R2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim3Q9R1R2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim3Q9R1R2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim3Q9R1R2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim3Q9R1R2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Gm15460-201ENSMUST00000118147 391 ntBASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Gm15321-201ENSMUST00000121290 288 ntBASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim3Q9R1R2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gm16215-201ENSMUST00000161990 637 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gm7730-201ENSMUST00000212486 454 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim3Q9R1R2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim3Q9R1R2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim3Q9R1R2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms