Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smco4Q9JIS3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smco4Q9JIS3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Gm15358-201ENSMUST00000119249 520 ntBASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.84□□□□□ -0.67
Smco4Q9JIS3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms