Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Gm13823-201ENSMUST00000119930 345 ntBASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Gm29541-201ENSMUST00000191351 678 ntBASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Lima1Q9ERG0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm23935-201ENSMUST00000102303 57 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm24270-201ENSMUST00000102326 57 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm6222-201ENSMUST00000120787 396 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm24245-201ENSMUST00000157318 57 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Lima1Q9ERG0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lima1Q9ERG0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms