Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
Chmp4cQ9D7F7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Gm33320-201ENSMUST00000192232 530 ntBASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp4cQ9D7F7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chmp4cQ9D7F7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Gm8396-201ENSMUST00000057361 823 ntBASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.26■□□□□ 0.19
Chmp4cQ9D7F7 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Gm15460-201ENSMUST00000118147 391 ntBASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Gm22175-201ENSMUST00000175007 78 ntBASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.25■□□□□ 0.19
Chmp4cQ9D7F7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms