Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim8Q99PJ2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim8Q99PJ2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim8Q99PJ2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim8Q99PJ2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Gm29541-201ENSMUST00000191351 678 ntBASIC13.33□□□□□ -0.28
Trim8Q99PJ2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Chchd1-203ENSMUST00000224633 557 ntBASIC13.33□□□□□ -0.28
Trim8Q99PJ2 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim8Q99PJ2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Gm25925-201ENSMUST00000158314 306 ntBASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Gm18889-201ENSMUST00000174284 929 ntBASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim8Q99PJ2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim8Q99PJ2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms