Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm17040-202ENSMUST00000170597 889 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Gm38210-201ENSMUST00000191944 809 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Gm26185-201ENSMUST00000157692 266 ntBASIC13.5□□□□□ -0.25
Cdh23Q99PF4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.5□□□□□ -0.25
Cdh23Q99PF4 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdh23Q99PF4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Gm23218-201ENSMUST00000158124 276 ntBASIC13.49□□□□□ -0.25
Cdh23Q99PF4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Gm45433-201ENSMUST00000209386 247 ntBASIC13.49□□□□□ -0.25
Cdh23Q99PF4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Gm2546-201ENSMUST00000182630 991 ntBASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh23Q99PF4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh23Q99PF4 Gm16397-201ENSMUST00000122201 494 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms